Isolation, Propagation and Biocontrol Activity of Indigenous
Bacteriophages against Brucella abortus
Arfat Yousaf Shaheen1, Ali Ahmad Sheikh1*, Masood Rabbani1, Wasim
Shehzad2, Zaigham Abbas3 and Munazzah Maqbool1
1Institute of Microbiology, University
of Veterinary and Animal Sciences, Sheikh Abdul Qadir Jelani Road Lahore
Pakistan
2Institute of
Biochemistry and Biotechnology, University of Veterinary and Animal Sciences,
Sheikh Abdul Qadir Jelani Road Lahore Pakistan
3Department of Microbiology & Molecular Genetics, Canal Bank Rd,
Punjab University New Campus, Lahore Punjab
*For correspondence: ali.ahmad@uvas.edu.pk
Received 17
November 2020; Accepted 18 January 2021; Published 16 April 2021
Abstract
Brucellosis, being a zoonotic disease, is difficult to
control despite the availability of vaccines. Bovine brucellosis could be
controlled effectively using brucellaphages. This study was conducted to
isolate bacteriophages against Brucella
abortus from cattle farms sewage/slurry
samples (n=50). Isolation and
propagation of brucellaphages was made through spot and plaque assay.
Two samples (n=2) were found positive on the plates as circular, clear, and
pinpoint plaques (0.3 to 0.5 mm) with 4.6×106 PFU/mL of
brucellaphage titre against Brucella
abortus RB51. One- step growth experiments revealed latent period of 120
min and burst size of 93 and 114 PFU for two isolated brucellaphages (ϕP1
and ϕP2) respectively. These phages were unable to lyse Staphylococcus aureus, Streptococcus spp., Salmonella spp., Escherichia
coli, Bacillus subtilis and Pasteurella multocida. Isolated
brucellaphages were stable up to 60°C and between 7 to 9 pH. No loss in phage
titres were observed at 4°C but phage titres were
reduced by one log at (-20°C) overnight. There was no effect of SM buffer,
normal saline and EDTA on stability of brucellaphages and addition of divalent
salts in medium showed significant increase in PFU. However, treatment with SDS
and chloroform destroyed the phages in one hour exposure. The phages
were found carrying double stranded DNA (~40 kb size) and two prominent protein
bands of 45 kDa and 70 kDa. Biocontrol activity of brucellaphages showed
average Brucella abortus count
reduction to 4.5×103 from
5.0×108 CFU/ g
of soil sample within 48 h when treated with maximum phage titre of 5.0×1011
PFU/ mL. Hence, this study revealed that
brucellaphages are present in our environment and can potentially be consider
for their cost-effective practical applications in inactivation of Brucella abortus after comprehensive
experimental evaluations. © 2021 Friends Science Publishers
Keywords: Brucellosis; Brucellaphages; Brucella abortus; Overlay technique; Characterization; Biocontrol
activity
Introduction
Bovine brucellosis
is a significant bacterial disease with zoonotic potential and economic
importance worldwide and is mainly caused by Brucella abortus. B. abortus is
a small,
non-motile, non-sporing, gram negative, facultative intracellular coccobacilli
of the genus Brucella. Brucella is a member of the Brucellaceae family, in the order
Rhizobiales and class Alphaproteo bacteria. Main routes of transmission
of Brucella organism is through mucous membranes, ingestion and also from broken
skin. Among various infectious diseases, brucellosis is one of the top-ranked
bacterial diseases prevalent in developing countries. It is a highly
contagious, chronic infectious disease in animals and among zoonotic diseases,
it ranked at second position (OIE 2019).
The most common consequences of bovine brucellosis are last trimester
abortions, retained placenta, metritis, infertility, orchitis and epididymitis
in animals, hence producing economic losses to livestock sector in terms of
abortion, low fertility rate, decrease milk yield and loss due to replacement
of the animal (Dean et al. 2012;
Manish et al. 2013).
Being zoonotic, it can be transferred to humans through
direct contact with infected animal material or indirectly by ingestion of
contaminated dairy products. In countries like Pakistan, importance of the
disease is more as majority of rural population is involved in livestock
farming (Shafee et al. 2011).
Seroprevalence of 18.6 and 8.7% was studied in herds and animals respectively
in various districts of Pakistan (Ali et
al. 2017; Arif et al. 2019).
Efforts are made to control the problem in endemic areas by using two
commercially available live vaccines (RB51 and S19), but these vaccines are not
producing desirable results and being live vaccines, these cause abortions in
pregnant animals and also have unwanted effects in humans exposed to the
vaccines. The effective control of brucellosis is by eradication program.
However, this procedure cannot be employed in developing countries like
Pakistan due to high cost of animals (Cutler 2005).
Bacteriophages have been found to be potential
candidates for prevention and treatment of many bacterial diseases. The phages
are very specific to their host and only target specific bacteria and this
specificity make them unique by not targeting human and other animal cells
(Chachra et al. 2012; Filippov et al. 2013). Previous literature had
studies regarding the bacteriophage-based diagnostics, phage typing, and
epidemiological investigation of brucellaphages (Gupta and Saxena 2017a;
Sergueev et al. 2017). Most of the
studies were about the genetic diversity among previously characterized
reference brucellaphages (Tb, Bk, R/C, Wb, Fi, Iz, Pr) but remains limited
about the successful use of brucellaphages for specific decontamination and
antibacterial therapy (Hammerl et al. 2017). Few studies have
been concerned with the use of specific bacteriophage for prophylaxis and
therapy against brucellosis (Chachra et al. 2012; Pandey et al. 2013; Prajapati et al. 2014; Jain et al. 2015; Gupta and Saxena 2017b; Saxena and Raj 2018).
However, there is not any study conducted so far regarding the use of specific
bacteriophage for the biocontrol of brucellosis with an idea of reducing Brucella contamination in livestock and
dairy farms. The past studies encouraged us to isolate bacteriophages active
against B. abortus in our country. So,
objectives of our first study in Punjab, Pakistan were to isolate, propagate
and evaluate biocontrol activity of bacteriophages against B. abortus, which may be fruitfully, applied in future studies of
field applications of brucellaphages for the control of bovine brucellosis.
Materials and
Methods
Location
This study was conducted at the University Diagnostic
Laboratory (UDL), University of Veterinary and Animal Sciences (UVAS), Lahore,
Pakistan from the year 2017–2019.
Samples
Samples of sewage water/slurry (n=50) were collected
from Brucella suspected livestock
farms, Punjab under strict safety measures recommended in OIE (2018). Out of 50 collected samples, 42
samples were of slurry (semi-liquid
mixture of manure) and 8 were of sewage drainages of Lahore.
Host strain
identification
Live
vaccine of bovine Brucella abortus (RB51)
was purchased from local veterinary drug store and was used as host strain, under strict biosafety precautions as
per recommended in OIE (2019). Growth of
B. abortus on solid media was
obtained by inoculating 0.2 mL of vaccine (RB51) on Tryptose Soy Agar (TSA) (Merck Millipore, Germany) and
incubated aerobically at 37°C for 3 to 5 days (Saxena and Raj 2018). To attain
the sufficient bacterial turbidity (O.D600=0.8),
different conditions were tested included tube cultures and cultures in flasks
by giving inoculation in test tube and conical Erlenmeyer flask. Liquid culture of B. abortus was
obtained by inoculating the loopful culture (single colony) of RB51
strain from TSA plate in Tryptose Soy Broth (TSB) (Merck Millipore, Germany) in conical Erlenmeyer flask, filled
as 1/5 of their nominal volume and incubated
at 150 rpm, 37°C overnight (Sergueev et al. 2017). RB51 strain was identified based on its characteristic of Table
1: Thermo cycler conditions for PCR
Stages |
PCR conditions |
Cycles |
|
Temp. |
Time |
||
Initial Denaturation |
95°C |
5 min |
1 |
Denaturation |
95°C |
1.15 min |
30 |
Annealing |
55.5°C |
2 min |
|
Extension |
72°C |
2 min |
|
Final extension |
72°C |
10 min |
1 |
resistance to rifampicin antibiotic by growing on
rifampicin added TSA medium (250 µg/mL) and incubated at 37oC
for 72 h (OIE 2019). For further confirmation, PCR was performed for the IS711 repetitive genetic region of
bacterial genome. Bacterial DNA isolated using QIAamp DNA Mini kit (QIAGEN) was
amplified as per method of (O’Leary et al. 2006). Thermocycler
(BIO-RAD T100TM) was programmed according to conditions as mentioned
in Table 1.
Isolation and
propagation of bacteriophages
Briefly, 50 mL 2X TSB,
40 mL slurry supernatant and 10 mL of broth culture of RB51 (log phase=24 h)
having (O.D600=0.8) were added and incubated at 37°C, 120 rpm
for 10 days. 10 mL sample was drawn out on alternate days i.e., (2, 4, 6
and so on up to 10 days), and checked for presence of bacteriophages through
spot assay (Chachra et al. 2012). Propagation of bacteriophages was
carried out by giving successive enrichment to filtrates found positive
in spotting, for three to four times with RB51 strain (Texas 2011). Subsequently, plaque assay was
performed, using double agar overlay technique to observe plaques. Optimum
adsorption time of phage with RB51 was determined by incubating the mixture of
filtrate and RB51 at 37oC at varied adsorption time (15, 30, 60, 90
and 120 min) before adding into soft agar containing 0.05 M CaCl2 and MgCl2 to the final
concentrations. Semisolid TSB with 0.65% wach of agarose
and bacteriological agar (maintained at 45°C in water bath) were used as soft agar for overlaying and both
formulations were compared for good recovery of plaques on them (Yang et al. 2010).
Titration and
purification of brucellaphages
Phage titre was measured
through plaque assay by serially diluting the sterile phage filtrates to six
different dilutions (10-1–10-6) in TSB as described by
(Gupta and Saxena 2017a). Purification of phages was carried out by three-fold
successive single plaque separation until homologous plaques were obtained (Hamza et al. 2016). Results
for all the experiments i.e.,
morphology of the plaques, host range, temperature and pH stability, molecular
characterization and biocontrol activity were compared with the positive
control brucellaphage strain, Tbilisi (Tb) phage obtained from Felix d’ Herelle
Reference Center for Bacterial Viruses (Laval University, QC, Canada) (Sergueev
et al. 2017).
One-step
phage growth curve and burst size
One-step growth experiments were conducted according to
Wong et al. (2014) with modifications
on time points and adsorption. A
mid-log phase bacterial culture was infected with a phage suspension to a MOI
ratio of 0.1. The mixture was incubated for 30 min at 37°C, with shaking at 120
rpm and was subsequently centrifuged at 7000 × g for 5 min. The supernatant was
used for the determination of unabsorbed phage titre by the agar overlay assay.
To determine the one-step growth kinetics of the phages, infected phages were
obtained by centrifugation at 7000 ×g for 5 min at 4°C. The infected phages
were resuspended in an equal volume of pre-warmed TSB medium and then incubated
at 37°C with agitation. After every 30 min, for up to 4 h, the sample was
withdrawn and assessed for phage titre using double agar overlay assay. The phage
titres were then plotted against time intervals (Wong et al. 2014).
Heterogeneous bacterial species specificity of brucellaphages
Host range of isolated brucellaphages (n=2 positive)
(ϕP1 and ϕP2) was checked against heterogeneous bacterial species of
veterinary importance viz., Pasteurella multocida (ATCC® 43137TM),
Staphylococcus aureus (ATCC® 23235TM), Streptococcus sp. (ATCC® 9884TM), E. coli (ATCC® 25922TM), Salmonella spp. (ATCC® 35664TM) and
Bacillus subtilis (ATCC® 23857TM) (Chachra et al. 2012).
Stability of brucellaphages
Thermal
stability of phages (ϕP1 and ϕP2) was checked by incubating phage
suspensions in TSB (pH=7.0) at various temperatures (25, 37, 45, 60, 70, 80, 90°C)
for one hour. Stability of phages at low temperatures i.e., - 20°C and 4°C was observed overnight. pH
stability of phages (ϕP1 and ϕP2) was determined by incubating phage
suspensions in TSB, adjusted in steps of 1 pH unit from pH 2 to 9, for one hour
at 37°C. Effect of treatment with organic solvents was studied
by incubating phage suspension with an equal volume of Sodium Dodecyl Sulphate
(SDS) (10%), chloroform and EDTA (0.01 M)
for one hour at 37°C. Effect of osmotic shock and inorganic salts was evaluated
by incubating the phage suspensions in Saline Magnesium (SM) buffer (100 mM
NaCl, 25 mM Tris-HCl pH 7.5, 8 mM MgSO4) and 0.5 molar
concentrations of Sodium chloride (NaCl), Calcium chloride (CaCl2),
and Magnesium chloride (MgCl2) respectively overnight at 37°C.
Phage-free and bacterial-free suspensions were used as controls incubated under
the same conditions as the phage-bacterial suspensions (Chachra et al. 2012; Hamza et al. 2016). Subsequently, phage
titres were checked by double agar overlay method.
Brucellaphages
genome and proteins characterization
Phage genome was extracted by PCI (phenol-chloroform-isoamyl
alcohol) method. Extracted genome was subjected to digestion with DNase I,
RNase A and S1 nuclease (Thermo Scientific, U.S.A.) (Zhu et al. 2009). Restriction endonuclease analysis was
carried out by incubating about
1 μg of each DNA sample with approximately 1 µL of
FastDigest™ restriction enzymes HindIII
and EcoRI (Thermo Fisher Scientific, U.S.A.) for 2 h at 37°C (Wang et al. 2018). The purified phage
preparation (1 × 1010 PFU/mL) and the host strain were analyzed for
proteins characterization through sodium dodecyl sulphate polyacrylamide gel
electrophoresis (SDS-PAGE) (Zhu et al. 2009).
Evaluation of biocontrol activity of brucellaphages
Biocontrol activities of
brucellaphages were determined against live cultures of B. abortus RB51 and B. abortus S99 strains mixed
in farm soil in sham (lab-based field conditions). For sham experiment, soil
sample (100 g) from dairy farm was collected and sterilized through autoclave
before inoculating it with 20 mL volume of broth culture of bacteria in log
phase containing 5×108 CFU/mL of B.
abortus strains and treated with ϕP1 and ϕP2
phages. Immediately after bacterial
inoculation, phage suspensions with specified titres i.e., 5×1011, 5×108, and 5×105
PFU/mL for each of phage were tested for bacterial count reductions by
adding in bacteria inoculated soil sample. Pre and post treatment counts of B. abortus in farm soil were estimated
through viable plate count. Bacterial count reduction was observed at 12, 24,
36, 48 and 72 h time points at 37°C. Tb phage was tested as control phage with same conditions applied for ϕP1
and ϕP2. Phage-free and bacterial-free suspensions were used as
controls incubated under the same conditions as the bacteria-phage treated soil
samples.
Statistical analysis
Results for two assays (Spot and Plaque) were compared
through McNemar
Test, and one-way analysis of variance (ANOVA), with 95% confidence
interval was used for comparing temperature and pH stability of phages as well
as for biocontrol activity by using statistical package for social sciences (S.P.S.S.)
version 23.0.
Fig. 1: Molecular
identification of B. abortus through
PCR, L: 100 bp DNA Ladder, 1: negative control, 2: RB51 vaccine DNA, 3:
negative sample 4: RB51 culture DNA
Fig. 2: Zones of Lysis
showing positive spot test for suspected phages against B. abortus RB51
Results
Pure culture of B.
abortus with isolated colonies (round, small, translucent and a pale honey
colour colonies of 0.5 mm diameter) was observed on TSA appeared after 72 h of
incubation. It was observed that turbidity in test tube was 0.2 at O.D600
in TSB at 37°C up to 48 h but
it was enhanced to O.D600 = 0.8 with TSB in 24 h at 37°C and shaking at 150 rpm in
conical Erlenmeyer flask. Growth of RB51 strain was found on TSA plates
containing rifampicin antibiotic. Upon further confirmation on molecular basis
through PCR, product (amplicon) size of 498 bp for IS711 gene for B. abortus was observed (Fig. 1).
Seven samples were found positive in screening (spot method) as clear
zones of lysis apparent on the plates indicated the presence of viable
bacteriophages against B. abortus
(Fig. 2) and two of the seven screened samples gave positive plaques in plaque
assay on the 6th day of incubation. Out of these 7 positive samples,
1 sample was found positive from sewage samples (n=8) tested and remaining 6
positive samples were of slurry samples (n=42) of livestock farms. In our first
attempt of plaque assay, pinpoint and hazy plaques of bacteriophages were
observed with soft agar (TSB containing 0.65% bacteriological agar) (Fig. 3a).
However, in second attempt of using soft agar preparation with 0.65% agarose,
we obtained the clear pinpoint plaques of diameter 0.5 mm as compared to
Fig. 3:
Positive plaques of bacteriophages against B.
abortus RB51. (a); pinpoint,
hazy plaques of brucellaphages from first enrichment
of slurry sample with B. abortus RB51
after incubation of 48 h at 37°C, (b);
pinpoint, clear plaques of ϕP1 after the addition of CaCl2 and
MgCl2 in soft agar, successive enrichment of 3 to 4 times and use of
0.65% agarose for soft agar and incubation of 48 h at 37°C
Fig. 4:
One-step growth curves of brucellaphages. (a); ϕP1 (b); ϕP2 and (c); Tb
soft agar preparation with 0.65% bacteriological agar
(Fig. 3b).
Plaque morphology of isolated brucellaphages (n=2) was
similar to that for Tb phage. Tb phage produced pinpoint, round and clear
plaques of 0.5 mm diameter but reached maximum of 2.0 mm after 48 h of
incubation with B. abortus. Optimum
adsorption time for the brucellaphages was determined to be 120 min in this
study as maximum plaques (4.5 × 10-6 PFU/mL) were recovered in 120
min. Results for two assays (Spot and Plaque) were compared, and
statistically non-significant 0.062 (P > 0.05) value was obtained
indicating that there is no significant difference between plaque assay and
spot assay. The latent time of ϕP1, ϕP2, and Tb was estimated to be
120, 120 and 90 min respectively, while the burst size of these phages was 93,
114 and 122 PFU per infected cell, respectively (Fig. 4).
Host range of brucellaphages
revealed that they are unable to lyse heterologous bacterial species. Testing
of the thermal stability of ϕP1 and ϕP2 phages revealed their
viability up to 60°C but when exposed to 70oC, their viability
starts decreasing (Fig. 5). In comparison, Tb phage had stability up to the 80°C
but beyond 80oC it was inactivated in one hour exposure. It was observed that refrigeration temperature (4°C) did
not affect the plaque formation of phages as well as no loss in titres of
phages was observed at 4°C. While, one log reduction in titre was observed at
freezing temperature (-20°C) overnight. When a set of temperatures were analyzed statistically
using univariate analysis of variance (ANOVA), non-significant difference (P=
0.14, 0.67, 0.06) was found in comparison of 25, 37, 45 and 60°C, respectively
while significant (P=0.00) difference was observed when compared higher
temperatures of 70 and 80°C. pH
stability of phages showed that present study brucellaphages have stability between pH 7 to 9, but
acidic pH of 2 to 4 decreased the phage viability in one hour exposure (Fig.
6). Significant difference (P=0.00) was present in comparison of acidic
and basic pH values using ANOVA. There was no reduction in phage titres was
observed in SM buffer and viability was maintained overnight. No effect on
viability of brucellaphages was observed after treatment with saline
solution and EDTA. However, treatment with SDS and chloroform
destroyed the brucellaphages in one hour exposure. Influence of inorganic salts
on phages,
showed a significant increase in PFU from 3.9 × 106 to 4.5 × 106
after the incorporation of CaCl2 and MgCl2 in the medium
containing phage suspension. NaCl neither enhanced the plaque size nor lessened the PFU, showing neither a positive
nor a negative effect on phage titre. Significant difference (P=0.00) was observed in
phage viability when treated with saline solution and EDTA in comparison with
SDS and chloroform.
Nucleic acid extracts of theses phages were found
resistant to RNase A and S1 nuclease but have sensitivity to DNase I enzyme.
The genome sizes of phages were approximately 40 kb for two isolated
brucellaphages and Tb phage (Fig. S1). HindIII
digestion of the three phages depicted the two extra bands in Tb phage while
the corresponding bands of ~1000 bp and ~1800 bp are absent in present study
phages. EcoRI digestion of phages
showed one extra band in Tb phage however other two phages have similar band
patterns (Fig. S2). Characterization of proteins of isolated brucellaphages and
Tb phage through SDS-PAGE showed coomassie-stained bands of different sizes.
The most prominent bands were of 45 kDa and 70 kDa in tested brucellaphages
(Fig. S3).
Biocontrol activities of
brucellaphages against live cultures of B.
abortus RB51 and B. abortus S99
strains mixed in farm slurry in sham
conditions showed the reduction in bacterial count at 24, 36, 48 and 72 h time
points (Table 2). This count was reduced to 107, 105, and
103 CFU/g after 24, 36 and 48 h treatment respectively.
Negligible bacterial count reduction was observed before 12 h and count reduction
became static after 72 h of treatment. Significant biocontrol activity (P-value
< 0.05) was observed among three
tested phages with specified titres in all treatments using ANOVA in three
replicate experiments.
Discussion
The presence of
bacteriophages against B. abortus was
studied in several countries which established a close relationship between
sensitivity of B. abortus cultures to
lysis by phages. They used field isolates as well as vaccine strains of B. abortus in their studies (Zhu et al. 2009; Pandey et al.
2013; Farlow et al. 2014; Hammerl et al. 2014; Tevdoradze et al. 2015; Gupta and Saxena
2017a; Hammerl et al.
2017). Therefore, it is not astonishing to find lytic bacteriophages
against B. abortus worldwide. In this
study, we first established the optimized growth conditions for the host
bacterial culture. For B. abortus,
results of present study, declared that the use of conical Erlenmeyer flask
instead of glass tube culture and shaking at 150 rpm were critical for
sufficient turbidity of B. abortus.
The results showed that increased turbidity (O.D600=
0.8) in flask could be due to shaking which provides aeration and splitting of
bacterial clumps in the broth. Increased bacterial turbidity within 24 h could
be advantageous to avoid phage resistance to host strain and for efficient
phage propagation. Our observation of increased bacterial turbidity with
increased aeration is correlated with Wundt (1957) observation, that growth of Brucella was greatly retarded by
inefficient gas exchange when cultures were contained in ‘tubes’ though several
liquid media were checked for the growth promoting capacity for Brucella. Gibby and Gibby (1964), also
suggested that if active growth phase of Brucella
is desired then its growth should be harvested before 24 h and counts of B. abortus growth declined slightly from
48 to 96 h. Similarly, previous experiments of Gee and Gerhardt (1946), showed
that the use of aerated liquid media, generation time of Brucella decreased as aeration was increased until aeration reached
2 volumes per min (volume of air to the volume of media).
Fig. 5:
Graphical representation of thermal stability of brucellaphages.
Phage suspensions in TSB (pH=7.0) were incubated for one hour at adjusted
temperatures. Post treatment viability was assessed through double agar overlay
technique. Log10 values of phage titres
(y-axis) were plotted against various temperatures (x-axis) for phage isolate 1
(ϕP1), phage isolate 2 (ϕP2) and positive control Tbilisi phage (Tb).
Data represent means ± SD (standard deviation) of three independent experiments
with similar results
Fig. 6: Graphical
representation of stability of brucellaphages at
acidic and basic pH values. Phage suspensions in TSB adjusted in pH range 2 to
9 were incubated for one hour at 37°C. Post treatment viability was assessed
through double agar overlay technique. Log10 values of phage titres (y-axis) were plotted against different pH values
(x-axis) for phage isolate 1 (ϕP1), phage isolate 2 (ϕP2) and
positive control Tbilisi phage (Tb). Data represent means ± SD (standard
deviation) of three independent experiments with similar results with 95%
confidence interval
In the
present study, Tb phage produced pinpoint, round and clear plaques of 0.5 mm
diameter but reached maximum of 2.0 mm after 48 h of incubation. Plaque
morphology of present study brucellaphages (ϕP1 and ϕP2) was same as
of Tb phage i.e., pinpoint, round and
clear plaques of 0.5 mm diameter. Both phages (ϕP1 and ϕP2) have
identical plaque morphology (round, clear and pinpoint plaques having 0.5 mm
diameter) after 48 h of incubation at 37°C. However, they were different in
isolation source/sample nature i.e.,
one sample was found positive from slurry of livestock farm and other from
sewage sample. Chachra et al. (2012);
Pandey et al. (2013); Gupta and
Saxena (2017b) and Saxena and Raj (2018) also found circular and clear plaques
of 0.1–3.0 mm Table 2: Biocontrol activity
of brucellaphages in sham experiment
Bacterial target inoculum (CFU/mL) |
Phage |
Phage titre
tested (PFU/mL) |
Bacterial
count reduction in (CFU/g) soil ± standard deviation with time intervals |
||||
12 h |
24 h |
36 h |
48 h |
72 h |
|||
B. abortus RB51- 5.0 × 108 |
ϕP1 |
5.0 × 1011 |
4.6
× 108 ± .009 |
5.1 × 107
± .008 |
6.8 × 105
± .006 |
4.5 × 103
± .009 |
4.3 × 103
± .010 |
5.0 × 108 |
4.7× 108
± .009 |
5.4 × 107
± .008 |
7.3 × 105
± .005 |
4.5 × 103
± .009 |
4.5 × 103
± .009 |
||
5.0 × 105 |
4.7 × 108
± .009 |
4.4 × 108
± .009 |
3.8 × 107
± .011 |
7.4 × 106
± .005 |
7.1 × 106
± .006 |
||
B. abortus RB51- 5.0 × 108 |
ϕP2 |
5.0 × 1011 |
4.7 × 108
± .009 |
6.1 × 107
± .039 |
7.2 × 105
± .020 |
4.8 × 103
± .009 |
4.7 × 103
± .009 |
5.0 × 108 |
4.9 × 108
± .008 |
5.5 × 107
± .007 |
7.5 × 105
± .005 |
5.0 × 103
± .008 |
4.7 × 103
± .009 |
||
5.0 × 105 |
5.0 × 108
± .008 |
4.5 × 108
± .009 |
4.0 × 107
± .010 |
7.9 × 106
± .005 |
7.6 × 106
± .005 |
||
B. abortus S99- 5.0 × 108 |
Tb |
5.0 × 1011 |
4.1 × 108
± .010 |
4.9 × 107
± .008 |
6.3 × 105
± .006 |
4.0 × 103
± .010 |
3.8 × 103
± .011 |
5.0 × 108 |
4.3 × 108
± .010 |
4.8 × 107
± .009 |
6.9 × 105
± .006 |
4.2 × 103
± .010 |
4.1 × 103
± .010 |
||
5.0 × 105 |
4.3 × 108
± .010 |
4.1 × 108
± .010 |
3.4 × 107
± .012 |
7.1 × 106
± .006 |
6.9 × 106
± .006 |
diameter of brucellaphages in
their studies. In the present study brucellaphages were isolated from slurry
samples of dairy farms on the 6th day of incubation. It was
attempted to isolate phages from the day 1 to day 5 but there was no indication
of phage in sample. This finding is correlated with study of Chachra et al. (2012) and Pandey et al. (2013), in which they isolated
brucellaphage from sewage sample of dairy farm on day sixth of incubation with
actively growing stage of B. abortus.
This could be because of the long generation time of the bacteria i.e., 4 h in liquid culture approximately as also reported by (McDuff et al.
1962).
Isolation
and propagation of bacteriophages for B.
abortus using spot assay method and double agar overlay technique for
plaques in this study demonstrated that initial spot and plaque assays gave the
evident positive results in enriched samples. It was revealed that
bacteriophages were present and were able to infect B. abortus as lysis was apparent on the plates in our environment.
Successive enrichment of three to four times, varying adsorption time, and
addition of CaCl2 and MgCl2, we obtained the clear
pinpoint plaques of brucellaphages. These results are in agreement with
Chhibber et al. (2014) and Rasool et al. (2016) indicating the crucial
importance of divalent ions, successive enrichment and adsorption time in
adsorption of phage to the host cell surface. Adsorption time determined for
present study phages corresponds to Tevdoradze et al. (2015) and Antadze et al. (2017) findings. Results for
one-step growth kinetics of present study phages are in line with Jones et al. (1968) and McDuff et al. (1962).
Our observations for host range of present study
brucellaphages indicated that they could not lyse heterogeneous bacterial
species i.e., S. aureus, Streptococcus sp.,
Salmonella sp., E. coli, Bacillus subtilis,
and P. multocida. Similar findings
were demonstrated by Pandey et al.
(2013) that their brucellaphage could not lyse any of the heterologous
bacteria. Prajapati et al. (2014)
also showed lytic activity of phage against B.
abortus strain 99, S19 and 544 as well as B. melitensis Rev 1 and B.
suis 1330, but did not show lysis against any of the heterogeneous
bacterial species. Hence, these results determined that brucellaphage is
specific for Brucella and not to
other gram positive and gram-negative bacteria which is advantageous that other
microflora in the body might not be disturbed.
In this study, stability of brucellaphages showed that
their viability decreased when exposed to 70°C and beyond 70°C it completely
became inactivated in one-hour exposure. They had stability at pH 7 to 9, but acidic
pH of 2 to 4 decreased the phage viability in one-hour exposure. Stability of
tested brucellaphages depicted that they retain their viability at 4°C but
freezing temperature (- 20°C) were not revealed to be suitable for storage of
phages as they lost their viability. Our results for temperature and pH
stability of brucellaphages are correlated with Pandey et al. (2013) who found stability of brucellaphage at basic pH, i.e. pH 8 with survival rate of 75.31% after 48 h treatment.
They also observed that at acidic pH of 2 to 4, the phage titre was gradually
decreased to zero and at pH 6 phage titre was decreased only to 38.9% within 48
h. Gupta and Saxena (2017b) also studied inactivation of phage at pH 2 and 4
after 4 and 12 h treatment. Our findings are also supported by Chachra et al. (2012) in favor of pH and
temperature stability that high temperature of 70°C and acidic pH is lethal for
brucellaphage viability. Evaluation of thermal stability and optimum pH
conditions of brucellaphages are helpful to standardize the phage therapy as
well as bio decontamination. Extreme resistance to temperature is advantageous
for brucellaphages to apply in field conditions to keep phages working in harsh
conditions.
Genome characteristics of our brucellaphages showed their
nucleic acid to be double-stranded DNA of 40 kb size, resistant to RNase A and
S1 nuclease but have sensitivity to DNase I enzyme. Restriction profile of
ϕP1 and ϕP2 revealed that they have different migration patterns i.e., ϕP2 moved slower than
ϕP1. This might be due to higher molecular weight of phage 2. These
characteristics are supported by Zhu et
al. (2009); Farlow et al. (2014); Hammerl et
al. (2014); Tevdoradze et al. (2015) and Hammerl et al. (2017). Results of
restriction of two phages revealed that they are different from positive
control brucellaphage Tb. The restriction endonuclease profiles were highly
reproducible and consistent with phage Tb. Restriction analysis of study phages
ascertained that our brucellaphage isolates are closely related but they are
different from Tb phage. Structural protein profile of present study phages by
SDS-PAGE revealed two prominent bands of 45 kDa and 70 kDa, which probably
represents the major capsid proteins. Zhu et
al. (2009) depicted nine bands, ranging from 40 to 85 kDa of the structural
proteins of Tbilisi phage. Similarly, Pandey et al. (2013), observed 4 bands of 65.98, 60.46, 48.56 and 43.97
kDa proteins in brucellaphage. Isolated
phages need to be further characterized particularly protein segments of the
isolated phages need to be investigated
for their antibacterial ability against Brucella
so that they may be used in the future for commercial lysate preparations. Biocontrol
activity of our brucellaphages against
live cultures of B. abortus
RB51 and B. abortus S99 strains mixed in farm slurry in sham conditions
showed significant reduction in bacterial counts when tested three of their
titres. This count was reduced to 107,
105 and 103 CFU/g after 24, 36 and 48 h treatment,
respectively. Negligible bacterial count reduction was observed before 12 h and
this might be due to longer generation time of Brucella (4 h) and log phase of 24 h. Count reduction became static
after 72 h of treatment. Plateau in reduction after 48 h might be due
resistance or stability issues of phages which is an inherit
limitation of our study. It needs to be investigated in future studies.
Conferring literature reviewed, there is no such study conducted so far about
the investigation of biocontrol activity of brucellaphages in vitro. Present study phages hold good antibacterial efficacy and
can serve as biocontrol agents for the purpose of specific decontamination of Brucella. However, some issues remain to
be controlled and studied as limitations of the present study such as the
presence of toxic agents including endotoxin in the phage preparations, phage
cocktails, stability and viability deficiencies, and the problem of bacterial
resistance against phages.
Conclusion
In conclusion, this study provides base line for the investigation
of indigenous bacteriophages for the field strains of B. abortus in laboratory in Pakistan. The isolated brucellaphages
themselves have considerably more potential for further characterization.
Therefore, more comprehensive studies are suggested in the future those might
be molecular and genetic characterization including sequencing of phages,
transmission electron microscopy, and in vitro and in vivo
experimental evaluation of the isolated brucellaphages. Further studies could
be designed to observe the bacterial resistance against the bacteriophages,
needing a cocktail of bacteriophages to cover wide range of Brucella strains, presence of endotoxin
in the phage preparations and stability and viability deficiencies.
Subsequently, these bacteriophages can be used for the effective treatment of Brucella contaminated soil and
environment of livestock and dairy farms, cost-effective diagnostics, and
therapy of brucellosis using bacteriophages in different novel composition.
Moreover, it will reduce the economic losses due to this deadly disease of
dairy sector.
Acknowledgment
The authors
gratefully acknowledge the financial support provided by Higher Education
Commission (HEC) project # 6782/Punjab/NRPU/R&D/HEC/2016 under National
Research Program for Universities, Pakistan and Denis Tremblay, (University
Laval, Quebec City, QC, Canada) for the provision of positive control phage.
Author Contributions
AAS, ZA, MR and WS conceived and designed the study. AYS
and AAS executed the experiments and analyzed the study results. MM helped in
research work. All authors critically revised the manuscript for important
intellectual contents and approved the final version.
Conflicts of Interes
The authors declare that they have no conflict of interest.
Data Availability
The data will be made avaialble on acceptable requests to the
corresponding author.
Ethics Approval
Not applicable.
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